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A modeling-based approach to optimize COVID-19 vaccine dosing schedules for improved protection
Prashant Dogra, Carmine Schiavone, Zhihui Wang, Javier Ruiz-Ramírez, Sergio Caserta, Daniela I. Staquicini, Christopher Markosian, Jin Wang, H. Dirk Sostman, Renata Pasqualini, Wadih Arap, Vittorio Cristini
Prashant Dogra, Carmine Schiavone, Zhihui Wang, Javier Ruiz-Ramírez, Sergio Caserta, Daniela I. Staquicini, Christopher Markosian, Jin Wang, H. Dirk Sostman, Renata Pasqualini, Wadih Arap, Vittorio Cristini
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Resource and Technical Advance COVID-19 Vaccines

A modeling-based approach to optimize COVID-19 vaccine dosing schedules for improved protection

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Abstract

While the development of different vaccines slowed the dissemination of SARS-CoV-2, the occurrence of breakthrough infections has continued to fuel the COVID-19 pandemic. To secure at least partial protection in the majority of the population through 1 dose of a COVID-19 vaccine, delayed administration of boosters has been implemented in many countries. However, waning immunity and emergence of new variants of SARS-CoV-2 suggest that such measures may induce breakthrough infections due to intermittent lapses in protection. Optimizing vaccine dosing schedules to ensure prolonged continuity in protection could thus help control the pandemic. We developed a mechanistic model of immune response to vaccines as an in silico tool for dosing schedule optimization. The model was calibrated with clinical data sets of acquired immunity to COVID-19 mRNA vaccines in healthy and immunocompromised participants and showed robust validation by accurately predicting neutralizing antibody kinetics in response to multiple doses of COVID-19 mRNA vaccines. Importantly, by estimating population vulnerability to breakthrough infections, we predicted tailored vaccination dosing schedules to minimize breakthrough infections, especially for immunocompromised individuals. We identified that the optimal vaccination schedules vary from CDC-recommended dosing, suggesting that the model is a valuable tool to optimize vaccine efficacy outcomes during future outbreaks.

Authors

Prashant Dogra, Carmine Schiavone, Zhihui Wang, Javier Ruiz-Ramírez, Sergio Caserta, Daniela I. Staquicini, Christopher Markosian, Jin Wang, H. Dirk Sostman, Renata Pasqualini, Wadih Arap, Vittorio Cristini

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Figure 6

Effect of heterogeneity in vaccine dosing schedules and immune health status on breakthrough infections at the population scale.

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Effect of heterogeneity in vaccine dosing schedules and immune health st...
(A) Average antibody levels in plasma, (B) corresponding vaccine or antibody efficacy, and (C) population fraction vulnerable to breakthrough infections due to wild-type strain (WT, solid blue line) and Omicron variant (OM, dotted orange line) of SARS-CoV-2 over time. Solid and dotted lines in A and B represent average behavior of 10,000 simulated individuals, and shaded bands indicate 90% prediction interval. Note that the first dose was administered on day 0 to each simulated individual, the second dose was administered between day 14 and day 56, and the third dose (i.e., first booster) was administered between day 150 and day 270. Red and blue brackets on x axis denote timing windows with respect to day 0 for second dose and third dose, respectively, used to design unique vaccine schedules in model simulations. Immune health status (f) of the simulated population varied between 0.5 and 1.

Copyright © 2026 American Society for Clinical Investigation
ISSN 2379-3708

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