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Repurposing of lonafarnib as a treatment for SARS-CoV-2 infection
Mohsin Khan, Parker Irvin, Seung Bum Park, Hannah M. Ivester, Inna Ricardo-Lax, Madeleine Leek, Ailis Grieshaber, Eun Sun Jang, Sheryl Coutermarsh-Ott, Qi Zhang, Nunziata Maio, Jian-Kang Jiang, Bing Li, Wenwei Huang, Amy Q. Wang, Xin Xu, Zongyi Hu, Wei Zheng, Yihong Ye, Tracey Rouault, Charles Rice, Irving C. Allen, T. Jake Liang
Mohsin Khan, Parker Irvin, Seung Bum Park, Hannah M. Ivester, Inna Ricardo-Lax, Madeleine Leek, Ailis Grieshaber, Eun Sun Jang, Sheryl Coutermarsh-Ott, Qi Zhang, Nunziata Maio, Jian-Kang Jiang, Bing Li, Wenwei Huang, Amy Q. Wang, Xin Xu, Zongyi Hu, Wei Zheng, Yihong Ye, Tracey Rouault, Charles Rice, Irving C. Allen, T. Jake Liang
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Research Article COVID-19 Virology

Repurposing of lonafarnib as a treatment for SARS-CoV-2 infection

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Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which causes coronavirus disease 2019 (COVID-19), has emerged as a global pandemic pathogen with high mortality. While treatments have been developed to reduce morbidity and mortality of COVID-19, more antivirals with broad-spectrum activities are still needed. Here, we identified lonafarnib (LNF), a Food and Drug Administration–approved inhibitor of cellular farnesyltransferase (FTase), as an effective anti–SARS-CoV-2 agent. LNF inhibited SARS-CoV-2 infection and acted synergistically with known anti-SARS antivirals. LNF was equally active against diverse SARS-CoV-2 variants. Mechanistic studies suggested that LNF targeted multiple steps of the viral life cycle. Using other structurally diverse FTase inhibitors and a LNF-resistant FTase mutant, we demonstrated a key role of FTase in the SARS-CoV-2 life cycle. To demonstrate in vivo efficacy, we infected SARS-CoV-2–susceptible humanized mice expressing human angiotensin-converting enzyme 2 (ACE2) and treated them with LNF. LNF at a clinically relevant dose suppressed the viral titer in the respiratory tract and improved pulmonary pathology and clinical parameters. Our study demonstrated that LNF, an approved oral drug with excellent human safety data, is a promising antiviral against SARS-CoV-2 that warrants further clinical assessment for treatment of COVID-19 and potentially other viral infections.

Authors

Mohsin Khan, Parker Irvin, Seung Bum Park, Hannah M. Ivester, Inna Ricardo-Lax, Madeleine Leek, Ailis Grieshaber, Eun Sun Jang, Sheryl Coutermarsh-Ott, Qi Zhang, Nunziata Maio, Jian-Kang Jiang, Bing Li, Wenwei Huang, Amy Q. Wang, Xin Xu, Zongyi Hu, Wei Zheng, Yihong Ye, Tracey Rouault, Charles Rice, Irving C. Allen, T. Jake Liang

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Figure 2

Effect of LNF on SARS-CoV-2 variants and LNF synergy with RDV and NRTV.

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Effect of LNF on SARS-CoV-2 variants and LNF synergy with RDV and NRTV.
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VeroE6 cells were infected with SARS-CoV-2-nLuc and treated with multiple concentrations of LNF alone and in combination with RDV or NRTV at the time of infection. At 24 hours after infection, the luciferase activity was measured and replication relative to DMSO-treated control was calculated. (A and B) Inhibition of SARS-CoV-2 replication achieved by a combination of varying concentrations of LNF and RDV (A) or NRTV (B). Infected cells were treated with compounds at concentrations ranging from 0–5 μM. Viral infectivity was normalized with the untreated (DMSO) infected cells and percentage of inhibition was calculated. Data represent mean values from 3 independent experiments and contour graphs for ZIP, LOEWE, HSA, and BLISS synergy were plotted using Synergyfinder. (C) The panel summarizes different synergy score statistics for LNF-RDV and LNF-NRTV combinations. The synergy experiments were repeated 2 times. (D) VeroE6 cells were infected with multiple variants of SARS-CoV-2 and cotreated with 10 μM LNF. At 24 hours after infection, total RNA was harvested, and the viral genome copy number was determined by qRT-PCR. The values for the DMSO-treated group were set to 100% and the relative numbers of genome copies were then calculated for the respective LNF-treated groups. The graph values are the mean ± SD of 3 independent experiments. ****P < 0.0001 by 1-way ANOVA with Dunnett’s test for multiple comparisons to the control.

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