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Chronic infection stunts macrophage heterogeneity and disrupts immune-mediated myogenesis
Richard M. Jin, Jordan Warunek, Elizabeth A. Wohlfert
Richard M. Jin, Jordan Warunek, Elizabeth A. Wohlfert
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Research Article Infectious disease Inflammation

Chronic infection stunts macrophage heterogeneity and disrupts immune-mediated myogenesis

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Abstract

The robust regenerative potential of skeletal muscle is imperative for the maintenance of tissue function across a host of potential insults including exercise, infection, and trauma. The highly coordinated action of multiple immune populations, especially macrophages, plays an indispensable role in guiding this reparative program. However, it remains unclear how skeletal muscle repair proceeds in a chronically inflamed setting, such as infection, where an active immune response is already engaged. To address this question, we used a cardiotoxin injury model to challenge the reparative potential of chronically infected muscle. Compared with regenerating naive skeletal muscle, infected skeletal muscle exhibited multiple indicators of delayed muscle repair including a divergent morphologic response to injury and dysregulated expression of myogenic regulatory factors. Further, using both flow cytometric and single-cell RNA sequencing approaches, we show that reduced macrophage heterogeneity due to delayed emergence of restorative subsets underlies dysfunctional tissue repair during chronic infection. Our findings highlight how the preexisting inflammatory environment within tissue alters reparative immunity and ultimately the quality of tissue regeneration.

Authors

Richard M. Jin, Jordan Warunek, Elizabeth A. Wohlfert

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Figure 4

Transcriptional profiling of total macrophages during CTX-induced injury in uninfected and infected skeletal muscle.

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Transcriptional profiling of total macrophages during CTX-induced injury...
Single-cell RNA sequencing was performed on macrophages isolated from uninfected CTX-injured (ctx), infected without CTX-injury (infected), and infected CTX-injured skeletal muscle. Data sets from each treatment group were aggregated for direct comparison. (A) t-SNE visualization of PCA and unsupervised cluster analysis performed on aggregated data set. Plot is annotated by bioinformatically identified clusters (left) and treatment group (right). (B) Scaled expression of Cd68, Mrc1, Ly6c2, and Nos2 overlaid on t-SNE plot of aggregated data set. (C) Dot plot representation of Cd68, Mrc1, Ly6c2, and Nos2 segregated by treatment group. Percentage expression of marker in each treatment group is represented by dot size. Average expression level in expressing cells is represented by color scale. (D) Venn diagram of differentially regulated genes identified in each treatment group. (E) GO and pathway enrichment analyses of 45 overlapping differentially regulated genes between infected and infected + CTX groups. Differentially regulated genes falling into selected significantly enriched terms and pathways are represented in the dot plot. Percentage expression of marker in each treatment group is represented by dot size. Average expression level in expressing cells is represented by color scale. Enriched terms and pathways were identified as significant at an adjusted P value ≤ 0.01 and FDR ≤ 0.05.

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