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RBM47 regulates intestinal injury and tumorigenesis by modifying proliferation, oxidative response, and inflammatory pathways
Saeed Soleymanjahi, Valerie Blanc, Elizabeth A. Molitor, David M. Alvarado, Yan Xie, Vered Gazit, Jeffrey W. Brown, Kathleen Byrnes, Ta-Chiang Liu, Jason C. Mills, Matthew A. Ciorba, Deborah C. Rubin, Nicholas O. Davidson
Saeed Soleymanjahi, Valerie Blanc, Elizabeth A. Molitor, David M. Alvarado, Yan Xie, Vered Gazit, Jeffrey W. Brown, Kathleen Byrnes, Ta-Chiang Liu, Jason C. Mills, Matthew A. Ciorba, Deborah C. Rubin, Nicholas O. Davidson
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Research Article Gastroenterology Inflammation

RBM47 regulates intestinal injury and tumorigenesis by modifying proliferation, oxidative response, and inflammatory pathways

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Abstract

RNA-binding protein 47 (RBM47) is required for embryonic endoderm development, but a role in adult intestine is unknown. We studied intestine-specific Rbm47-knockout mice (Rbm47-IKO) following intestinal injury and made crosses into ApcMin/+ mice to examine alterations in intestinal proliferation, response to injury, and tumorigenesis. We also interrogated human colorectal polyps and colon carcinoma tissue. Rbm47-IKO mice exhibited increased proliferation and abnormal villus morphology and cellularity, with corresponding changes in Rbm47-IKO organoids. Rbm47-IKO mice adapted to radiation injury and were protected against chemical-induced colitis, with Rbm47-IKO intestine showing upregulation of antioxidant and Wnt signaling pathways as well as stem cell and developmental genes. Furthermore, Rbm47-IKO mice were protected against colitis-associated cancer. By contrast, aged Rbm47-IKO mice developed spontaneous polyposis, and Rbm47-IKO ApcMin/+ mice manifested an increased intestinal polyp burden. RBM47 mRNA was decreased in human colorectal cancer versus paired normal tissue, along with alternative splicing of tight junction protein 1 mRNA. Public databases revealed stage-specific reduction in RBM47 expression in colorectal cancer associated independently with decreased overall survival. These findings implicate RBM47 as a cell-intrinsic modifier of intestinal growth, inflammatory, and tumorigenic pathways.

Authors

Saeed Soleymanjahi, Valerie Blanc, Elizabeth A. Molitor, David M. Alvarado, Yan Xie, Vered Gazit, Jeffrey W. Brown, Kathleen Byrnes, Ta-Chiang Liu, Jason C. Mills, Matthew A. Ciorba, Deborah C. Rubin, Nicholas O. Davidson

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Figure 4

Differentially expressed genes in small intestine from young (8–14 weeks) Rbm47-IKO mice.

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Differentially expressed genes in small intestine from young (8–14 weeks...
(A) Heatmap illustration of top upregulated and downregulated genes in Rbm47-IKO versus Rbm47fl/fl mice. (B) STRING analysis of upregulated genes related to oxidative response (left) and WNT signaling (right). (C) Enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways in upregulated (top) and downregulated (bottom) genes. (D) qPCR evaluation of differentially upregulated genes involved in antioxidative response and glutathione metabolism (mean ± SEM, unpaired t test, n = 4 fl/fl and 6 IKO); *P < 0.05. (E) Relative Fndc5 mRNA abundance at successive time points after actinomycin D treatment as a fraction of baseline Fndc5 in enteroids (top) and colonoids (bottom) (mean ± SEM, unpaired t test, n = 3 independent experiments per genotype/time point); *P < 0.05. (F) Abundance of RBM47, ACTIN, and FNDC5 proteins in middle small intestine mucosa from Rbm47fl/fl and Rbm47-IKO mice (each lane represents a pool of 3 separate extracts per genotype). (G) Tissue content of total (left) and reduced (right) glutathione in middle small intestine from young mice (mean ± SEM, unpaired t test, n = 8 fl/fl and 6 IKO). ***P < 0.001. (H–K) qPCR evaluation of differentially upregulated genes involved in WNT signaling and cell proliferation (H), stem cell markers and developmental genes (I), genes involved in ERBB2/MAPK pathway (J), and IL-33–related genes (K) (mean ± SEM, unpaired t test, n = 4 fl/fl and 6 IKO); *P < 0.05, **P < 0.01.

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