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BPDCN MYB fusions regulate cell cycle genes, impair differentiation, and induce myeloid–dendritic cell leukemia
Christopher A.G. Booth, Juliette M. Bouyssou, Katsuhiro Togami, Olivier Armand, Hembly G. Rivas, Kezhi Yan, Siobhan Rice, Shuyuan Cheng, Emily M. Lachtara, Jean-Pierre Bourquin, Alex Kentsis, Esther Rheinbay, James A. DeCaprio, Andrew A. Lane
Christopher A.G. Booth, Juliette M. Bouyssou, Katsuhiro Togami, Olivier Armand, Hembly G. Rivas, Kezhi Yan, Siobhan Rice, Shuyuan Cheng, Emily M. Lachtara, Jean-Pierre Bourquin, Alex Kentsis, Esther Rheinbay, James A. DeCaprio, Andrew A. Lane
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Research Article Hematology

BPDCN MYB fusions regulate cell cycle genes, impair differentiation, and induce myeloid–dendritic cell leukemia

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Abstract

MYB fusions are recurrently found in select cancers, including blastic plasmacytoid DC neoplasm (BPDCN), an acute leukemia with poor prognosis. They are markedly enriched in BPDCN compared with other blood cancers and, in some patients, are the only obvious somatic mutation detected. This suggests that they may alone be sufficient to drive DC transformation. MYB fusions are hypothesized to alter the normal transcription factor activity of MYB, but, mechanistically, how they promote leukemogenesis is poorly understood. Using CUT&RUN chromatin profiling, we found that, in BPDCN leukemogenesis, MYB switches from being a regulator of DC lineage genes to aberrantly regulating G2/M cell cycle control genes. MYB fusions found in patients with BPDCN increased the magnitude of DNA binding at these locations, and this was linked to BPDCN-associated gene expression changes. Furthermore, expression of MYB fusions in vivo impaired DC differentiation and induced transformation to generate a mouse model of myeloid-dendritic acute leukemia. Therapeutically, we present evidence that all-trans retinoic acid (ATRA) may cause loss of MYB protein and cell death in BPDCN.

Authors

Christopher A.G. Booth, Juliette M. Bouyssou, Katsuhiro Togami, Olivier Armand, Hembly G. Rivas, Kezhi Yan, Siobhan Rice, Shuyuan Cheng, Emily M. Lachtara, Jean-Pierre Bourquin, Alex Kentsis, Esther Rheinbay, James A. DeCaprio, Andrew A. Lane

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Figure 1

MYB aberrantly regulates G2/M cell cycle genes in BPDCN.

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MYB aberrantly regulates G2/M cell cycle genes in BPDCN.
(A) MYB, H3K27a...
(A) MYB, H3K27ac, and IgG CUT&RUN tracks at the BCL2 and CLEC4C (BDCA2) loci in the indicated cell types. (B) Top 5 ranked motifs enriched in MYB CUT&RUN peaks in normal pDCs and BPDCN PDX cells, and percent of peaks containing each motif. (C) Top 10 ranked Reactome gene sets overlapping with genes showing promoter binding of MYB in the indicated samples. (D) (Left) GSEA comparing normal pDCs and BPDCN PDX cells for genes showing differential MYB binding at promoter regions in BPDCN PDX AL03 relative to normal pDCs (n = 283 genes increased and n = 181 genes decreased MYB binding). (Right) Top 3 ranked motifs enriched in differentially bound MYB sites mapping to promoters, and percent of sites containing each motif. (E) MYB and IgG CUT&RUN tracks at the CDC20 locus in the indicated cell types.

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