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A machine learning–based triage system for systemic EBV-positive T/NK cell lymphoproliferative diseases of childhood
Pujun Guan, Zihang Chen, Hanze Dong, Xia Guo, Juan Huang, Tian Dong, Mi Wang, Xiaoxi Lu, Fei Huang, Wenbin Li, Yuan Tang, Li Zhang, Ling Pan, Ju Gao, Shikun Wang, Rongbo Liu, Wenyan Zhang, Sha Zhao, Weiping Liu
Pujun Guan, Zihang Chen, Hanze Dong, Xia Guo, Juan Huang, Tian Dong, Mi Wang, Xiaoxi Lu, Fei Huang, Wenbin Li, Yuan Tang, Li Zhang, Ling Pan, Ju Gao, Shikun Wang, Rongbo Liu, Wenyan Zhang, Sha Zhao, Weiping Liu
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Research Article Hematology Infectious disease

A machine learning–based triage system for systemic EBV-positive T/NK cell lymphoproliferative diseases of childhood

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Abstract

Systemic Epstein-Barr virus–positive (EBV-positive) T/NK cell lymphoproliferative diseases of childhood (sEBV+T/NK-LPD) are a spectrum of rare diseases that have highly variable biological behavior, from indolent conditions to highly aggressive malignancies. Clinicians currently face substantial challenges in promptly assessing disease severity and predicting patient outcomes, leading to limitations in treatment planning. To address this challenge, we constructed a comprehensive triage system to aid in rapid clinical interventions. The study included 156 patients with newly diagnosed sEBV+T/NK-LPD from 42 institutions. An independent prospective cohort of 35 newly enrolled patients was further included to evaluate the model’s performance. An additional 45 patients from the literature and 18 patients who underwent hematopoietic stem cell transplantation were included to test the score’s generalizability. An integrative machine learning strategy was applied to identify robust and optimal factors and to integrate multiple algorithms to enhance the system’s performance and stability. This system, termed COLLAPSED, identifies critical factors and provides a stable, high-performing ensemble. This model was validated externally and simplified into a risk score to improve interpretability and accessibility. The COLLAPSED system substantially enhances clinicians’ ability to rapidly and precisely identify high-risk patients, thus enabling timely clinical decision-making and expedited initiation of potentially lifesaving treatments.

Authors

Pujun Guan, Zihang Chen, Hanze Dong, Xia Guo, Juan Huang, Tian Dong, Mi Wang, Xiaoxi Lu, Fei Huang, Wenbin Li, Yuan Tang, Li Zhang, Ling Pan, Ju Gao, Shikun Wang, Rongbo Liu, Wenyan Zhang, Sha Zhao, Weiping Liu

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Figure 3

Evaluation of the COLLAPSED system across cohorts.

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Evaluation of the COLLAPSED system across cohorts.
(A) Time-dependent di...
(A) Time-dependent discriminative performance of the ensemble model and its 3 base algorithms (ELN, RSF, and SNN) over time, evaluated by the cumulative/dynamic area under the time-dependent receiver operating characteristic curve (AUC). (B) Distribution of feature importance (SHAP values) and binned scores of the 7 selected predictors within the training dataset. The color gradient from dark blue to light purple represents the relative feature values. Box plot colors correspond to score bins (0 to 4) assigned to each predictor, and the dashed line marks the mean SHAP value within each bin. LC, lymphocyte count. (C) Risk stratification based on the COLLAPSED score in the training and validation datasets (the primary retrospective cohort). (D) Risk stratification based on the COLLAPSED score in the prospective cohort. (E) Risk stratification based on the COLLAPSED score using the literature-derived cohort. Group differences in C–E were compared using the log-rank test.

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ISSN 2379-3708

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