ResearchIn-Press PreviewGastroenterology
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10.1172/jci.insight.199226
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Wang, Y. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Adeleke, D. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Xie, X. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Yang, Z. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Wang, X. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Loi, G. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Yang vom Hofe, A. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Singh, M. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
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1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Kudira, R. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Castro-Rojas, C. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Pfuhler, L. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Alquraish, M. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Sylvestre, P. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
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1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Trout, A. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Miraldi, E. in: PubMed | Google Scholar
1Division of Pediatric Gastroenterology, Hepatology and Nutrition, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
2Divisions of Immunobiology and Biomedical Information, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
3Department of Mathematical Sciences, University of Cincinnati, Cincinnati, United States of America
4Biomedical Informatics Graduate Program, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
5Division of Pathology and Laboratory Medicine, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
6Department of Radiology, Cincinnati Children’s Hospital Medical Center and University of Cincinnati College of Medicine, Cincinnati, United States of America
7Divisions of Immunobiology and Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, United States of America
Find articles by Miethke, A. in: PubMed | Google Scholar
Published April 23, 2026 - More info
Primary sclerosing cholangitis (PSC) is a chronic, idiopathic cholestatic liver disease characterized by inflammation and fibrosis of the bile ducts, yet the cellular crosstalk driving periductal fibrosis remains poorly defined. This study applied a multi-omics approach integrating spatial transcriptomics, RNA-seq, and proteomics to characterize fibrotic periductal regions and their cell–cell communications. Macrophages (MP) subsets, including monocyte-drived-(Mo)MP and lipid-associated-macrophage (LAM)-like, co-localized with cholangiocytes, lymphocytes, and hepatic stellate cells (HSC1). Cell niche analysis identified periductal regions with elevated fibrotic signals, where cell–cell communication analysis revealed potential MP–HSC interactions involving 17 fibrotic driver genes in MP, including ITGB2, GRN, and CCL21, and 6 fibrotic effector genes in HSC. In validation analyses, bulk RNA-seq data showed higher driver and effector gene expression in PSC with established fibrosis compared to early-stage PSC or healthy control (HC). Plasma proteins encoded by MP driver genes were elevated in PSC and in patients with elevated (≥3.29 kPa) liver stiffness on MR elastography. Furthermore, immunofluorescence and SHG imaging showed enrichment of CD68+/CD18+(ITGB2) macrophages in fibrotic regions of PSC liver biopsies. These findings revealed enrichment of MoMP and LAM-like macrophages in fibrotic regions and suggest that they likely contribute to fibrotic activation of nearby HSCs in PSC.